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Adult-mediated connectivity affects inferences on population dynamics and stock assessment of nursery-dependent fish populations ArchiMer
Archarnbault, Benoit; Le Pape, Olivier; Baulier, Loic; Vermard, Youen; Veron, Matthieu; Rivot, Etienne.
We explore how alternative hypotheses on the degree of mixing among local subpopulations affect statistical inferences on the dynamics and stock assessment of a harvested flatfish population, namely, the common sole population in the Eastern Channel (ICES area VIId). The current paradigm considers a single, well-mixed, spatially homogeneous population with juveniles from all coastal nursery grounds along the French and UK coasts that contribute to a single adult population and one pool of eggs. Based on the available data and ecological knowledge, we developed a spatial Bayesian integrated life-cycle model that consists of three subpopulations (one near the UK coast and two near the French coast, denoted UK, West FR and East FR, respectively) supported by...
Tipo: Text Palavras-chave: Solea solea; Spatial life-cycle model; Coastal nurseries; Connectivity; Stock assessment; Hierarchical bayesian model.
Ano: 2016 URL: http://archimer.ifremer.fr/doc/00333/44430/44231.pdf
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Functional roles of an engineer species for coastal benthic invertebrates and demersal fish ArchiMer
Chaalali, Aurelie; Brind'Amour, Anik; Dubois, Stanislas; Le Bris, Herve.
Through their tissues or activities, engineer species create, modify, or maintain habitats and alter the distribution and abundance of many plants and animals. This study investigates key ecological functions performed by an engineer species that colonizes coastal ecosystems. The gregarious tubiculous amphipod Haploops nirae is used as a biological model. According to previous studies, the habitat engineered by H.nirae (i.e., Haploops habitat) could provide food and natural shelter for several benthic species such as benthic diatoms belonging to the gender Navicula, the micrograzer Geitodoris planata, or the bivalve Polititapes virgineus. Using data from scientific surveys conducted in two bays, this study explored whether (1) the Haploops sandy-mud...
Tipo: Text Palavras-chave: Coastal nurseries; Fish community; Haploops nirae; Isotopic diversity indices; Stable isotopes.
Ano: 2017 URL: http://archimer.ifremer.fr/doc/00396/50722/51431.pdf
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Genetic structure of the common sole (Solea solea) in the Bay of Biscay: Nurseries as units of selection? ArchiMer
Guinand, B; Rolland, Jean-luc; Bonhomme, Francois.
Coastal and estuarine areas in the Bay of Biscay are essential nursery habitats for sole (Solea solea). Using three intronic markers, we investigated patterns of genetic differentiation among cohorts of juveniles (0+, 1+, sub-adults) inhabiting four major nurseries in the Vilaine and Loire river estuaries, the Pertuis d' Antioche strait, and the Gironde estuary. Genetic differentiation was not significant for the age 0- and 1-groups, but was among sub-adult samples (theta(WC) = 0.017; P = 0.031). Hierarchical analyses of genotypic frequencies by nested multivariate ANOVA using redundancy analysis indicated that northern nurseries of Loire and Vilaine rivers had different patterns of genotypic variation with age than southern nurseries of the Pertuis d'...
Tipo: Text Palavras-chave: Selection; Genetic drift; EPIC PCR; Population genetics; Coastal nurseries; Juveniles; Flatfish.
Ano: 2008 URL: http://archimer.ifremer.fr/doc/2008/publication-4299.pdf
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